numpy
pandas
dsp-pandas
scipy
scikit-learn>=1.5
gseapy!=1.1.5
pingouin<0.6.0
umap-learn
statsmodels
combat
inmoose
requests
rarfile
pandera

[all]
biopython
python-louvain
networkx
lifelines
kmapper
snfpy

[dev]
black[jupyter]
flake8
ruff
isort
pytest
pytest-cov
twine
wheel
jupytext
ipykernel

[docs]
sphinx
sphinx-book-theme
myst-nb
ipywidgets
sphinx-new-tab-link!=0.2.2
jupytext
sphinx-copybutton
sphinx-llms-txt
vuecore
